Hi-C of Caenorhabditis elegans DNA Zoo Sample4082 - SRA

SRX9788326: Hi-C of Caenorhabditis elegans DNA Zoo Sample4082
1 ILLUMINA (NextSeq 500) run: 1M spots, 177M bases, 78.8Mb downloads

Design: Rao, Huntley et al., 2014

Submitted by: Baylor College of Medicine

Study: DNA Zoo

The DNA Zoo is a consortium focused on facilitating conservation efforts through the rapid generation and release of high-quality genomics resources.

Sample: Roundworm

Library:

Name: HIC5254

Instrument: NextSeq 500

Strategy: Hi-C

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Runs: 1 run, 1M spots, 177M bases, 78.8Mb

Run	# of Spots	# of Bases	Size	Published
SRR13364242	1,040,970	177M	78.8Mb	2021-01-06

Supplemental Content

Physcomitrella patens ecotype Gransden 2004 chromosome 16, Phypa V3, whole genom...
Physcomitrella patens ecotype Gransden 2004 chromosome 16, Phypa V3, whole genome shotgun sequence
gi|1370471950|gnl|ASM:GCF_000000605 6|ref|NC_037268.1||gpp|GPC_000003673.1||gnl|NCBI_GENOMES|75830

Nucleotide
Physcomitrella patens ecotype Gransden 2004 chromosome 18, Phypa V3, whole genom...
Physcomitrella patens ecotype Gransden 2004 chromosome 18, Phypa V3, whole genome shotgun sequence
gi|1370471948|gnl|ASM:GCF_000000605 8|ref|NC_037270.1||gpp|GPC_000003675.1||gnl|NCBI_GENOMES|75832

Nucleotide
Metagenome-assembled genome_120
Metagenome-assembled genome_120

biosample
Physcomitrella patens ecotype Gransden 2004 chromosome 13, whole genome shotgun ...
Physcomitrella patens ecotype Gransden 2004 chromosome 13, whole genome shotgun sequence
gi|1334413430|gb|CM009328.1||gnl|WG U|Chr13

Nucleotide
Homo sapiens myomesin 1 (MYOM1) gene, MYOM1:c.4222G>A allele, partial cds
Homo sapiens myomesin 1 (MYOM1) gene, MYOM1:c.4222G>A allele, partial cds
gi|1471157337|gb|MF523536.1|

Nucleotide

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